lyngby_ui_main

PURPOSE

SYNOPSIS

DESCRIPTION

 lyngby_ui_main       - Main function for the GUI for lyngby

       function lyngby_ui_main(command,parameter1)
       function lyngby_ui_main

       Input:  command,parameter1  Both are internal callback arguments, 
                                   to start this function just type
                                   lyngby_ui_main

       Main function for the graphical interface to lyngby. Calls the
       setup windows, main analysis and viewing functions.

           lyngby_ui_view    Result viewing
           lyngby_bat_test   Ardekani t-test
           lyngby_baf_test   Ardekani F-test
           lyngby_baf2_main  Ardekani F-test with nuisance estimation
           lyngby_xcorr      Cross-correlation 
           lyngby_fir_main   FIR filter
           lyngby_efir_main  Exhaustive FIR filter
           lyngby_km_main    K-means
           lyngby_ks_main    Kolmogorov-Smirnov
           lyngby_lzit_main  Lange-Zeger
           lyngby_pois_main  Poisson filter
           lyngby_ts_main    Ordinary t-text
           lyngby_cons_main  Consensus modeling

       See also LYNGBY, LYNGBY_UI_VIEW, LYNGBY_BAT_TEST,
                LYNGBY_BAF_TEST, LYNGBY_BAF2_TEST, LYNGBY_XCORR,
                LYNGBY_FIR_MAIN, LYNGBY_EFIR_MAIN, LYNGBY_KM_MAIN,
                LYNGBY_KS_MAIN, LYNGBY_LZIT_MAIN, LYNGBY_POIS_MAIN,
                LYNGBY_TS_MAIN, LYNGBY_CONS_MAIN.

 $Id: lyngby_ui_main.m,v 1.136 2002/03/12 16:14:37 fnielsen Exp $

CROSS-REFERENCE INFORMATION

• lyngby_baf2_global lyngby_baf2_global - Global variables for Ardekani nuisance F-test
• lyngby_baf2_init lyngby_baf2_init - Initialize globals for Ardekani F-test with nuisance
• lyngby_baf_global lyngby_baf_global - Global variables for Ardekani F-test
• lyngby_baf_init lyngby_baf_init - Initialize globals for Ardekani F-test
• lyngby_bat_global lyngby_bat_global - Global variables for Ardekani t-test
• lyngby_bat_init lyngby_bat_init - Initialize globals for Ardekani t-test
• lyngby_cc_global lyngby_cc_global - Global variables for cross-correlation
• lyngby_cons_global lyngby_cons_global - Consensus global variables declaration
• lyngby_cons_init lyngby_cons_init - Consensus global variables initialization
• lyngby_efir_global lyngby_efir_global - Global variables for Exhaustive FIR analysis method
• lyngby_efir_init lyngby_efir_init - Initialize global variables for EFIR analysis
• lyngby_fir_global lyngby_fir_global - Global variables for FIR analysis method
• lyngby_fir_init lyngby_fir_init - Initialize global variables for FIR analysis
• lyngby_global lyngby_global - File defining global variables
• lyngby_ica_global lyngby_ica_global - Global variables for ICA analysis
• lyngby_ica_init lyngby_ica_init - Initialize global variables for ICA analysis
• lyngby_ikm_global lyngby_ikm_global - Iterative K-means, Global variables
• lyngby_ikm_init lyngby_ikm_init - Iterative K-means, Global variables init.
• lyngby_init lyngby_init - Initialize the global variables
• lyngby_km_global lyngby_km_global - K-means, Global variables declarations
• lyngby_km_init lyngby_km_init - K-means, Global variables initialization
• lyngby_ks_global lyngby_ks_global - Global variables for KS analysis method
• lyngby_ks_init lyngby_ks_init - Initialize globals for KS-test analysis
• lyngby_log lyngby_log - Log
• lyngby_lzgs_global lyngby_lzgs_global - Global variables for LZ Grid Search analysis
• lyngby_lzgs_init lyngby_lzgs_init - Initialize global variables for LZGS
• lyngby_lzit_global lyngby_lzit_global - Global variables for iterative LZ
• lyngby_lzit_init lyngby_lzit_init - Initialize global variables for iterative LZ
• lyngby_mkm_global lyngby_mkm_global - Meta K-means, Global variables declaration
• lyngby_mkm_init lyngby_mkm_init - Meta K-means, Global variables initialization
• lyngby_nnr_global lyngby_nnr_global - Global variables for NNR analysis method
• lyngby_nnr_init lyngby_nnr_init - Initialize global variables for NNR analysis
• lyngby_nns_global lyngby_nns_global - Global variables for NNS analysis
• lyngby_nns_init lyngby_nns_init - Initialize global variables for NNS analysis
• lyngby_paradigm lyngby_paradigm - Returns the paradigm
• lyngby_pois_global lyngby_pois_global - Poisson filter, Global variables
• lyngby_pois_init lyngby_pois_init - Poisson filter, Initialize global variables
• lyngby_prep_global lyngby_prep_global - Global variables for preprocessing
• lyngby_run lyngby_run - Returns the run specification
• lyngby_scva_global lyngby_scva_global - Global variables for SCVA analysis
• lyngby_scva_init lyngby_scva_init - Initialize global variables for SCVA analysis
• lyngby_sop_global lyngby_sop_global - Global variables for SOP analysis
• lyngby_sop_init lyngby_sop_init - Initialize global variables for SOP analysis
• lyngby_svd_global lyngby_svd_global - Global variables for SVD analysis
• lyngby_svd_init lyngby_svd_init - Initialize global variables for SVD analysis
• lyngby_ts_global lyngby_ts_global - Global variables for TS analysis method
• lyngby_ts_init lyngby_ts_init - Initialize globals for t-test analysis method
• lyngby_ui_baf2_init lyngby_ui_baf2_init - Ardekani's nuisance F-test, init. of param.
• lyngby_ui_baf_init lyngby_ui_baf_init - Ardekani's F-test, GUI for init. of param.
• lyngby_ui_bat_init lyngby_ui_bat_init - Initialization for Ardekani's t-test
• lyngby_ui_cc_init lyngby_ui_cc_init - User interface for init. of cross-correlation
• lyngby_ui_cons_init lyngby_ui_cons_init - Initialization for Consensus modeling
• lyngby_ui_credit lyngby_ui_credit - Display a credit
• lyngby_ui_efir_init lyngby_ui_efir_init - UI for initialization of EFIR model
• lyngby_ui_externals lyngby_ui_externals - Window for editing/creating external
• lyngby_ui_fir_init lyngby_ui_fir_init - User interface for FIR filter analysis
• lyngby_ui_global lyngby_ui_global - Defines global for the user interface
• lyngby_ui_ica_init lyngby_ui_ica_init - GUI for initialization of ICA model
• lyngby_ui_ikm_init lyngby_ui_ikm_init - GUI for Iterative K-means initialization
• lyngby_ui_km_init lyngby_ui_km_init - GUI for K-means parameter initialization
• lyngby_ui_ks_init lyngby_ui_ks_init - KS, GUI for initialization of parameters
• lyngby_ui_loadfile lyngby_ui_loadfile - Opens a window for specifying file parameters
• lyngby_ui_lzgs_init lyngby_ui_lzgs_init - Lange-Zeger GUI init of parameters
• lyngby_ui_lzit_init lyngby_ui_lzit_init - GUI for iterative Lange-Zeger initialization
• lyngby_ui_main lyngby_ui_main - Main function for the GUI for lyngby
• lyngby_ui_message lyngby_ui_message - Display a message
• lyngby_ui_mkm_init lyngby_ui_mkm_init - GUI for Meta K-means initialization
• lyngby_ui_nnr_init lyngby_ui_nnr_init - User interface for NNR method
• lyngby_ui_nns_init lyngby_ui_nns_init - GUI for Neural network saliency
• lyngby_ui_option lyngby_ui_option - Option/setup for user interface
• lyngby_ui_paradigm lyngby_ui_paradigm - User interface for paradigm viewing and editing
• lyngby_ui_pois_init lyngby_ui_pois_init - GUI, Poisson filter, initialization
• lyngby_ui_preproc lyngby_ui_preproc - UI for setting up preprocessing parameters
• lyngby_ui_run lyngby_ui_run - User interface for run viewing/specification
• lyngby_ui_scva_init lyngby_ui_scva_init - GUI for init of Strother CVA
• lyngby_ui_sop_init lyngby_ui_sop_init - GUI of init. of SOP model
• lyngby_ui_svd_init lyngby_ui_svd_init - GUI for initialization of SVD model
• lyngby_ui_ts_init lyngby_ui_ts_init - Initialization of t-test
• lyngby_uis_baf lyngby_uis_baf - Script executed for Ardekani's F-test
• lyngby_uis_baf2 lyngby_uis_baf2 - Script executed for Ardekani's nuisance F
• lyngby_uis_baf2_v lyngby_uis_baf2_v - Script for Arkani's F-test with nuisance view
• lyngby_uis_baf_v lyngby_uis_baf_v - Script for Ardekani F-test view
• lyngby_uis_bat lyngby_uis_bat - Script executed for Ardekani's t-test
• lyngby_uis_bat_v lyngby_uis_bat_v - Script for Ardekani't t-test view
• lyngby_uis_cc lyngby_uis_cc - Script executed for cross-correlation anal.
• lyngby_uis_cc_v lyngby_uis_cc_v - Script for cross-correlation view
• lyngby_uis_cons lyngby_uis_cons - Script executed for consensus
• lyngby_uis_cons_v lyngby_uis_cons_v - Script for Consensus viewing
• lyngby_uis_efir lyngby_uis_efir - Script executed at the EFIR analysis
• lyngby_uis_efir_v lyngby_uis_efir_v - Script for 'exhaustive FIR' viewing
• lyngby_uis_fir lyngby_uis_fir - Script executed at the FIR analysis
• lyngby_uis_fir_v lyngby_uis_fir_v - Script for FIR view
• lyngby_uis_ica lyngby_uis_ica - Script executed for ICA
• lyngby_uis_ica_v lyngby_uis_ica_v - Script for ICA view
• lyngby_uis_ikm lyngby_uis_ikm - Script executed for iterative K-means
• lyngby_uis_ikm_v lyngby_uis_ikm_v - Script for Iterative K-means view
• lyngby_uis_km lyngby_uis_km - Script executed for K-means analysis
• lyngby_uis_km_v lyngby_uis_km_v - Script for K-means view
• lyngby_uis_ks lyngby_uis_ks - Script executed for Kolmogorov-Smirnoff
• lyngby_uis_ks_v lyngby_uis_ks_v - Script for Kolmogorov-Smirnov view
• lyngby_uis_lzgs lyngby_uis_lzgs - Script executed for Lange-Zeger Grid Search
• lyngby_uis_lzgs_v lyngby_uis_lzgs_v - Script for Lange-Zeger gridsearch view
• lyngby_uis_lzit lyngby_uis_lzit - Script executed for Lange-Zeger, Iterative
• lyngby_uis_lzit_v lyngby_uis_lzit_v - Script for Lange-Zeger 'iterative' view
• lyngby_uis_mkm lyngby_uis_mkm - Script executed for Meta K-means analysis
• lyngby_uis_mkm_v lyngby_uis_mkm_v - Script for Meta K-means viewing
• lyngby_uis_nnr lyngby_uis_nnr - Script executed for Neural network regression
• lyngby_uis_nnr_v lyngby_uis_nnr_v - Script for neural network regression view
• lyngby_uis_nns lyngby_uis_nns - Script executed for Neural network saliency
• lyngby_uis_nns_v lyngby_uis_nns_v - Script for neural network saliency view
• lyngby_uis_none_v lyngby_uis_none_v - Script for 'original' view
• lyngby_uis_pois lyngby_uis_pois - Script executed for Poisson filter analysis
• lyngby_uis_pois_v lyngby_uis_pois_v - Script for Poisson filter view
• lyngby_uis_scva lyngby_uis_scva - Script executed for SCVA analysis
• lyngby_uis_scva_v lyngby_uis_scva_v - Script for SCVA view
• lyngby_uis_sop lyngby_uis_sop - Script executed for SOP analysis
• lyngby_uis_sop_v lyngby_uis_sop_v - Script for SOP view
• lyngby_uis_svd lyngby_uis_svd - Script executed for SVD analysis
• lyngby_uis_svd_v lyngby_uis_svd_v - Script for SVD view
• lyngby_uis_ts lyngby_uis_ts - Script executed for t-test analysis
• lyngby_uis_ts_v lyngby_uis_ts_v - Script for t-test view

• lyngby lyngby - lyngby start, Calls lyngby_ui_main
• lyngby_ui_loadfile lyngby_ui_loadfile - Opens a window for specifying file parameters
• lyngby_ui_main lyngby_ui_main - Main function for the GUI for lyngby
• lyngby_ui_preproc lyngby_ui_preproc - UI for setting up preprocessing parameters
• lyngby_ui_preproc_normalize lyngby_ui_preproc_normalize - UI for setting up preprocessing parameters