 lyngby | lyngby - lyngby start, Calls lyngby_ui_main |
| lyngby_baf2_global | lyngby_baf2_global - Global variables for Ardekani nuisance F-test |
| lyngby_baf2_init | lyngby_baf2_init - Initialize globals for Ardekani F-test with nuisance |
| lyngby_baf2_main | lyngby_baf2_main - Ardekani's F-test with nuisance estimation |
| lyngby_baf2_test | lyngby_baf2_test - Barbak Ardekani's F-test with nuisance estimation |
| lyngby_baf_global | lyngby_baf_global - Global variables for Ardekani F-test |
| lyngby_baf_init | lyngby_baf_init - Initialize globals for Ardekani F-test |
| lyngby_baf_test | lyngby_baf_test - Barbak Ardekani's F-test |
| lyngby_bat_global | lyngby_bat_global - Global variables for Ardekani t-test |
| lyngby_bat_init | lyngby_bat_init - Initialize globals for Ardekani t-test |
| lyngby_bat_test | lyngby_bat_test - t-test using the Ardekani t-method |
| lyngby_batch_baf2 | lyngby_batch_fg - Batch for Ardekani's F-test with nuisance |
| lyngby_batch_bmr | lyngby_batch_bmr - Batch for Binomial mixture ROC curve |
| lyngby_batch_cc | lyngby_batch_cc - Batch for cross-correlation |
| lyngby_batch_cons | lyngby_batch_cons - Batch for consensus modeling |
| lyngby_batch_fg | lyngby_batch_fg - Batch for Fisher's G harmonic analysis |
| lyngby_batch_fir | lyngby_batch_fir - Batch for singular value decomposition |
| lyngby_batch_ica | lyngby_batch_ica - Batch for independent components analysis |
| lyngby_batch_prep | lyngby_batch_prep - Batch preprocessing |
| lyngby_cc_global | lyngby_cc_global - Global variables for cross-correlation |
| lyngby_cdf_beta | lyngby_cdf_beta - Beta cumulative probability function |
| lyngby_cdf_bin | lyngby_cdf_bin - Binomial distribution function |
| lyngby_cdf_chi2 | lyngby_cdf_chi2 - X^2 cumulated distribution function |
| lyngby_cdf_f | lyngby_cdf_f - Fisher's F distribution |
| lyngby_cdf_fishersg | lyngby_cdf_fishersg - Cumulative distribution for Fisher's g |
| lyngby_cdf_gauss | lyngby_cdf_gauss - Gaussian (normal) distribution function |
| lyngby_cdf_t | lyngby_cdf_t - Student t distribution |
| lyngby_cdf_wilrank | lyngby_cdf_wilrank - "Wilcoxon sign rank" distribution |
| lyngby_circle | lyngby_circle - Draw a circle |
| lyngby_classerr | lyngby_classerr - Classification error |
| lyngby_cons_global | lyngby_cons_global - Consensus global variables declaration |
| lyngby_cons_init | lyngby_cons_init - Consensus global variables initialization |
| lyngby_cons_main | lyngby_cons_main - Consensus modeling |
| lyngby_corrlin | lyngby_corrlin - Lin's concordance correlation coefficient |
| lyngby_cumperiodo | lyngby_cumperiodo - Normalized cumulated periodogram |
| lyngby_cva | lyngby_cva - Canonical variate analysis (Canonical Ridge) |
| lyngby_datatype2bit | lyngby_datatype2bit - Return number of bits for datatype |
| lyngby_design | lyngby_normalize - Normalize in vertical direction of a datamatrix |
| lyngby_design_events2design | lyngby_design_events2design - Convert events to design matrix column |
| lyngby_dropedge | lyngby_dropedge - Drop scans at the paradigm shifts |
| lyngby_efir_global | lyngby_efir_global - Global variables for Exhaustive FIR analysis method |
| lyngby_efir_init | lyngby_efir_init - Initialize global variables for EFIR analysis |
| lyngby_efir_main | lyngby_efir_main - Main exhautive FIR function |
| lyngby_filefind | lyngby_filefind - Find the position of a string in a file |
| lyngby_filter | lyngby_filter - function for averaging volumes |
| lyngby_fir_convolve | lyngby_fir_convolve - Convolve the FIR kernel with the input |
| lyngby_fir_error | lyngby_fir_error - FIR residual signal (Quadratic error) |
| lyngby_fir_global | lyngby_fir_global - Global variables for FIR analysis method |
| lyngby_fir_init | lyngby_fir_init - Initialize global variables for FIR analysis |
| lyngby_fir_main | lyngby_fir_main - Regularized FIR filter, main function |
| lyngby_fir_masscent | lyngby_masscenter - Returns the masscenter of the FIR kernel |
| lyngby_fir_paradigm2design | lyngby_fir_paradigm2design - Paradigm vector to design matrix |
| lyngby_fir_plot | lyngby_fir_plot - Plot paradigm, data and FIR model |
| lyngby_fir_regmatrix | lyngby_fir_regmatrix - Construct regularization matrix |
| lyngby_fir_test_chi2 | lyngby_fir_test_chi2 - Chi square test for FIR filter |
| lyngby_full2mask | lyngby_full2mask - Convert indices from Full volume to ROI volume |
| lyngby_getdata | lyngby_getdata - Returns the masked datamatrix |
| lyngby_getinfo | lyngby_getinfo - Get volume info from a file |
| lyngby_getslice | lyngby_getslice - Extracts a slice from a volume |
| lyngby_getvolume | lyngby_getvolume - Get a volume from a file |
| lyngby_global | lyngby_global - File defining global variables |
| lyngby_gmm_error | lyngby_gmm_error - Gaussian mixture model, error |
| lyngby_gmm_fit | lyngby_gmm_fit - Gaussian mixture model, fitting |
| lyngby_gmm_plot | lyngby_gmm_plot - Plot gaussian mixture model |
| lyngby_histeq | lyngby_histeq - Perform histogram equalization |
| lyngby_ica_bs_est | lyngby_ica_bs_est - Bell & Sejnowski ICA estimation |
| lyngby_ica_global | lyngby_ica_global - Global variables for ICA analysis |
| lyngby_ica_init | lyngby_ica_init - Initialize global variables for ICA analysis |
| lyngby_ica_ms_est | lyngby_ica_ms_est - Molgedey-Schuster ICA |
| lyngby_ica_nbs_est | lyngby_ica_nbs_est - Non-symmetric Bell & Sejnowski ICA |
| lyngby_idf_beta | lyngby_idf_beta - Inverse beta culumative probability function |
| lyngby_idf_chi2 | lyngby_idf_chi2 - Invers X^2 distribution function |
| lyngby_idf_f | lyngby_idf_f - Inverse cumulative F distribution. |
| lyngby_idf_gauss | lyngby_idf_gauss - Inverse cumulated Gaussian distribution |
| lyngby_idf_t | lyngby_idf_t - Inverted Student t distribution |
| lyngby_ikm_bic | lyngby_ikm_bic - Bayesian information criterion for K-means |
| lyngby_ikm_global | lyngby_ikm_global - Iterative K-means, Global variables |
| lyngby_ikm_init | lyngby_ikm_init - Iterative K-means, Global variables init. |
| lyngby_ikm_main | lyngby_ikm_main - Iterative K-means clustering |
| lyngby_ikm_plot_w | lyngby_ikm_plot_w - Plot Within variance for iterative K-means |
| lyngby_image | lyngby_image - Plot a slice |
| lyngby_img_regclean | lyngby_img_regclean - cleaning of image |
| lyngby_img_regident | lyngby_img_regindent - Region identification |
| lyngby_index2tmask | lyngby_index2tmask - Return time mask from indices |
| lyngby_index2vmask | lyngby_index2vmask - Return voxel from indices |
| lyngby_init | lyngby_init - Initialize the global variables |
| lyngby_invlogistic | lyngby_invlogistic - Inverse logistic function |
| lyngby_km_bic | lyngby_km_bic - Bayesian information criterion for K-means |
| lyngby_km_centersim | lyngby_km_centersim - K-means center similarity |
| lyngby_km_error | lyngby_km_error - K-means, error |
| lyngby_km_global | lyngby_km_global - K-means, Global variables declarations |
| lyngby_km_init | lyngby_km_init - K-means, Global variables initialization |
| lyngby_km_loglikelihood | lyngby_km_loglikelihood - Log likelihood of K-means model |
| lyngby_km_main | lyngby_km_main - Main function for K-means clustering |
| lyngby_km_plot_dist | lyngby_km_plot_dist - Plot summary of cluster center similarity |
| lyngby_km_plot_scat | lyngby_km_plot_scat - K-means scattergram of cluster centers |
| lyngby_km_within | lyngby_km_within - K-means within-variance (within intertia) |
| lyngby_kronadd | lyngby_kronadd - Kronecker add |
| lyngby_ks_global | lyngby_ks_global - Global variables for KS analysis method |
| lyngby_ks_init | lyngby_ks_init - Initialize globals for KS-test analysis |
| lyngby_ks_main | lyngby_ks_main - Kolmogorov Smirnov test |
| lyngby_ks_prob | lyngby_ks_prob - Kolmogorov-Smirnov probability |
| lyngby_ks_test | lyngby_ks_test - Kolmogorov-Smirnov test of two arrays. |
| lyngby_log | lyngby_log - Log |
| lyngby_lz_error | lyngby_lz_error - Lange-Zeger residual signal (Quadratic error) |
| lyngby_lz_lambda | lyngby_lz_lambda - The Lange-Zeger hemodynamic response function |
| lyngby_lz_masscent | lyngby_lz_masscenter - Returns the masscenter of the Lange Zeger Kernel |
| lyngby_lz_plot | lyngby_lz_plot - Plot Paradigm, data and Lange-Zeger model |
| lyngby_lz_plottheta | lyngby_lz_plottheta - Plot Lange-Zeger theta1 against theta2 |
| lyngby_lzgs_global | lyngby_lzgs_global - Global variables for LZ Grid Search analysis |
| lyngby_lzgs_init | lyngby_lzgs_init - Initialize global variables for LZGS |
| lyngby_lzgs_main | lyngby_lzgs_main - Lange-Zeger model with grid search |
| lyngby_lzgs_search | lyngby_lzgs_search - Lange Zeger main algorithm for grid search |
| lyngby_lzit_algo | lyngby_lzit_algo - Lange-Zeger, optimization of model |
| lyngby_lzit_beta | lyngby_lzit_beta - Lange-Zeger, Estimate beta parameter |
| lyngby_lzit_conv | lyngby_lzit_conv - Lange-Zeger, Convolve kernel with the input |
| lyngby_lzit_cost | lyngby_lzit_cost - The cost function used in the Lange-Zeger model |
| lyngby_lzit_ftlamb | lyngby_lzit_ftlamb - Lange-Zeger, Fourier transformed of lambda |
| lyngby_lzit_global | lyngby_lzit_global - Global variables for iterative LZ |
| lyngby_lzit_init | lyngby_lzit_init - Initialize global variables for iterative LZ |
| lyngby_lzit_main | lyngby_lzit_main - Main function for Lange-Zeger estimation |
| lyngby_lzit_noise | lyngby_lzit_noise - Noise estimate in the Lange-Zeger model |
| lyngby_lzit_pickf | lyngby_lzit_pickf - Pick frequencies out from the data matrix |
| lyngby_lzit_thopt | lyngby_lzit_thopt - Lange-Zeger, Optimize theta parameters |
| lyngby_mask2full | lyngby_mask2full - Convert indices from ROI to Full volume |
| lyngby_meangeo | lyngby_meangeo - Geometric mean |
| lyngby_meanhl | lyngby_meanhl - Hodges-Lehmann estimator |
| lyngby_mkm_global | lyngby_mkm_global - Meta K-means, Global variables declaration |
| lyngby_mkm_init | lyngby_mkm_init - Meta K-means, Global variables initialization |
| lyngby_mod | lyngby_mod - Modulus function |
| lyngby_msvd_main | lyngby_msvd_main - Perform meta svd comparison of selected models. |
| lyngby_nn_ccdc | lyngby_nn_ccdc - NN-classifier cost function and derivative |
| lyngby_nn_cddevds | lyngby_nn_cddevds - 2nd order, entropic, input, diag. sym. |
| lyngby_nn_cddewda | lyngby_nn_cddewda - Classifier neural network, output, diag 2nd |
| lyngby_nn_cddewds | lyngby_nn_cddewds - Classifier neural network, output, diag 2nd |
| lyngby_nn_cddru | lyngby_nn_cddru - 2nd order der. of regularization for weights |
| lyngby_nn_cdev | lyngby_nn_cdev - Classifier neural network, input 1st der. |
| lyngby_nn_cdew | lyngby_nn_cdew - Classifier neural network, output 1st der. |
| lyngby_nn_cdru | lyngby_nn_cdru - Neural network, regularization, 1st der. |
| lyngby_nn_cerror | lyngby_nn_cerror - Classifier neural network error |
| lyngby_nn_cforward | lyngby_nn_cforward - Classifier neural network forward |
| lyngby_nn_cmain | lyngby_nn_cmain - Main functions for classifier neural network |
| lyngby_nn_cost | lyngby_nn_cost - Cost function = error + regularization |
| lyngby_nn_cpruneobd | lyngby_nn_cpruneobd - Classifier neural network, OBD pruning |
| lyngby_nn_csoftline | lyngby_nn_csoftline - Classifier neural network soft linesearch |
| lyngby_nn_csoftmax | lyngby_nn_csoftmax - Softmax for neural network classifier |
| lyngby_nn_ctrain | lyngby_nn_ctrain - Classifier neural network training |
| lyngby_nn_eddevds | lyngby_nn_eddevds - 2nd order, entropic, input, diag. sym. |
| lyngby_nn_eddewd | lyngby_nn_eddewd - Entropic neural network, output, diag 2nd |
| lyngby_nn_eddru | lyngby_nn_eddru - 2nd order der. of regularization for weights |
| lyngby_nn_edev | lyngby_nn_edev - Entropic neural network, input 1st der. |
| lyngby_nn_edew | lyngby_nn_edew - Entropic neural network, output, 1st der. |
| lyngby_nn_edru | lyngby_nn_edru - First order derivative, Regularization |
| lyngby_nn_eehl | lyngby_nn_eehl - Neural network entropic error (Hodge-Lehmann) |
| lyngby_nn_eemedian | lyngby_nn_eemedian - Neural network entropic error (median) |
| lyngby_nn_eerror | lyngby_nn_eerror - Calculate (cross-)entropic error |
| lyngby_nn_eforward | lyngby_nn_eforward - Entropic neural network, feed-forward |
| lyngby_nn_emain | lyngby_nn_emain - Main function for Entropic Neural network |
| lyngby_nn_epruneobd | lyngby_nn_epruneobd - Pruning by Optimal Brain Damage (entropic) |
| lyngby_nn_esoftline | lyngby_nn_esoftline - Soft linesearch with the entropic cost function |
| lyngby_nn_etarget | lyngby_nn_etarget - Normalize target for entropic neural network |
| lyngby_nn_etrain | lyngby_nn_etrain - Entropic neural network, training |
| lyngby_nn_initvw | lyngby_nn_initvw - Initialize weights in neural network |
| lyngby_nn_plotnet | lyngby_nn_plotnet - Neural network, plot the network weights |
| lyngby_nn_pruneobd | lyngby_nn_pruneobd - Pruning by Optimal Brain Damage |
| lyngby_nn_qddeus | lyngby_nn_qddeus - 2nd der., quad., all weights, gauss approx. |
| lyngby_nn_qddevds | lyngby_nn_qddevds - 2nd der., quadratic, input, diag gauss. |
| lyngby_nn_qddevs | lyngby_nn_qddevs - 2nd der., quadratic, input, gauss approx. |
| lyngby_nn_qddewds | lyngby_nn_qddewds - 2nd order der, quadratic, output, diag gauss |
| lyngby_nn_qddews | lyngby_nn_qddews - 2nd. order der., quadratic, output, gauss approx. |
| lyngby_nn_qddru | lyngby_nn_qddru - 2nd order der. of regularization for weights |
| lyngby_nn_qdev | lyngby_nn_qdev - Quadratic neural network, input, 1st der. |
| lyngby_nn_qdew | lyngby_nn_qdew - First order derivative, quadratic, Output weights |
| lyngby_nn_qdru | lyngby_nn_qdru - Quadratic neural network, 1st der. reg. |
| lyngby_nn_qerror | lyngby_nn_qerror - Quadratic error |
| lyngby_nn_qforward | lyngby_nn_qforward - Neural network forward with linear output function |
| lyngby_nn_qmain | lyngby_nn_qmain - Main function for quadratic neural network |
| lyngby_nn_qpruneobd | lyngby_nn_qpruneobd - Pruning by Optimal Brain Damage (quadratic) |
| lyngby_nn_qsoftline | lyngby_nn_esoftline - Soft linesearch with the quadratic costfunction |
| lyngby_nn_qtrain | lyngby_nn_qtrain - Quadratic neural network, training |
| lyngby_nn_reg2reg | lyngby_nn_reg2reg - Standardize regularization |
| lyngby_nn_setsplit | lyngby_nn_setsplit - Split the data into training and validation set |
| lyngby_nn_tanh | lyngby_nn_tanh - Faster hyperbolic tangent |
| lyngby_nn_u2vw | lyngby_nn_u2vw - Vectorize neural network weights |
| lyngby_nn_vw2u | lyngby_nn_vw2u - Vectorize neural network weights |
| lyngby_nnr_global | lyngby_nnr_global - Global variables for NNR analysis method |
| lyngby_nnr_init | lyngby_nnr_init - Initialize global variables for NNR analysis |
| lyngby_nnr_main | lyngby_nnr_main - Main function for Neural network Regression |
| lyngby_nns_esalmap | lyngby_nns_esalmap - Saliency map with entropic cost function |
| lyngby_nns_global | lyngby_nns_global - Global variables for NNS analysis |
| lyngby_nns_init | lyngby_nns_init - Initialize global variables for NNS analysis |
| lyngby_nns_main | lyngby_nns_main - Main function for Neural network saliency |
| lyngby_normalize | lyngby_normalize - Normalize (Preprocess) a datamatrix |
| lyngby_numscans | lyngby_numscans - Returns the masked number of scans volume |
| lyngby_opls | lyngby_opls - Orthonormalized PLS |
| lyngby_opt_cg | lyngby_opt_cg - Rasmussen/Goutte's conjugate gradient minimization |
| lyngby_opt_gradient | lyngby_opt_gradient - Optimization with Gradient minimization |
| lyngby_paradigm | lyngby_paradigm - Returns the paradigm |
| lyngby_pca_eqtest | lyngby_pca_eqtest - PCA test for equal eigenvalues |
| lyngby_pca_main | lyngby_pca_main - Main PCA analysis |
| lyngby_pcafilter | lyngby_pcafilter - Reduce the dimension or filter a matrix with PCA filtering |
| lyngby_pde_binmix | lyngby_pde_binmix - Estimation of binomial mixture model |
| lyngby_pde_binmix_der | lyngby_pde_binmix_der - Derivative of the binomial mixture |
| lyngby_pde_binmix_ll | lyngby_pde_binmix_ll - Loglikelihood of mixture of binomials |
| lyngby_pdf_beta | lyngby_pdf_beta - Beta probability density function |
| lyngby_pdf_bin | lyngby_pdf_bin - Binomial probability density function |
| lyngby_pdf_f | lyngby_pdf_f - F probability density function |
| lyngby_pdf_gamma | lyngby_pdf_gamma - Gamma distribution density |
| lyngby_pdf_gauss | lyngby_pdf_gauss - Gaussian (normal) density function |
| lyngby_pdf_poisson | lyngby_pdf_poisson - Poisson probability density function |
| lyngby_plot_boxplot | lyngby_plot_boxplot - Box plot |
| lyngby_plotfilter | lyngby_plotfilter - Plot FIR response |
| lyngby_plotmatch | lyngby_plotmatch - Plot paradigm, data and model |
| lyngby_pois_error | lyngby_pois_error - Poisson residual signal (Quadratic error) |
| lyngby_pois_forward | lyngby_pois_forward - Possion kernel forward (prediction) |
| lyngby_pois_forwn | lyngby_pois_forwn - Possion kernel forward (prediction) |
| lyngby_pois_global | lyngby_pois_global - Poisson filter, Global variables |
| lyngby_pois_init | lyngby_pois_init - Poisson filter, Initialize global variables |
| lyngby_pois_main | lyngby_pois_main - Main function for Possion filter |
| lyngby_pois_toptim | lyngby_pois_toptim - Possion kernel optimization |
| lyngby_prep_detrend | lyngby_prep_detrend - Detrending |
| lyngby_prep_global | lyngby_prep_global - Global variables for preprocessing |
| lyngby_prep_init | lyngby_prep_init - Initialize global variables for preprocessing |
| lyngby_read_ana4d | lyngby_read_ana4d - Reads a 4D dimensional ANALYZE file |
| lyngby_read_analyze | lyngby_read_analyze - Reads an ANALYZE file |
| lyngby_read_header | lyngby_read_header - Reads header information of a volume file |
| lyngby_read_sdt | lyngby_read_sdt - Read a Stimulate SDT/SPR file |
| lyngby_read_vapet | lyngby_read_vapet - Read a 3D VAPET file |
| lyngby_read_vapet4d | lyngby_read_vapet4d - Read a 4D VAPET file |
| lyngby_read_volume | lyngby_read_volume - Reads a volume from a recognized file |
| lyngby_read_volumes | lyngby_read_volumes - Reads volumes from files |
| lyngby_readanahdr | lyngby_readanahdr - Reads an ANALYZE header |
| lyngby_readanavol | lyngby_readanavol - Reads an ANALYZE img file |
| lyngby_readvahdr4 | lyngby_readvahdr4 - Reads the header information in a 4 dimensional VAPET file |
| lyngby_readvapethdr | lyngby_readvapethdr - Reads the header information in a VAPET file |
| lyngby_readvapetvol | lyngby_readvapetvol - Reads a VAPET volume from a file |
| lyngby_readvavol4 | lyngby_readvavol4 - Reads a 4 dimensional VAPET structure from a file |
| lyngby_readxpihdr | lyngby_readxpihdr - Read header from EC flexible format |
| lyngby_readxpivol | lyngby_readxpivol - Read data from EC flexible (Xprime) format |
| lyngby_roi | lyngby_roi - Returns the begin and end index of the volume |
| lyngby_roi2vmask | lyngby_roi2vmask - Transform ROI definition to masking matrix |
| lyngby_run | lyngby_run - Returns the run specification |
| lyngby_runinfo | lyngby_runinfo - Number of runs and scans within runs |
| lyngby_scva_global | lyngby_scva_global - Global variables for SCVA analysis |
| lyngby_scva_init | lyngby_scva_init - Initialize global variables for SCVA analysis |
| lyngby_scva_main | lyngby_scva_main - Strother Canonical variate analysis |
| lyngby_sdesign | lyngby_sdesign - Strother design matrix |
| lyngby_set_and | lyngby_set_and - set intersection: S1 /\ S2 |
| lyngby_set_diff | lyngby_set_diff - set difference: S1 \ S2 |
| lyngby_set_unique | lyngby_set_unique - Set thining: all elements different |
| lyngby_sliceindex | lyngby_sliceindex - Returns indices for a specified slice |
| lyngby_sop_global | lyngby_sop_global - Global variables for SOP analysis |
| lyngby_sop_init | lyngby_sop_init - Initialize global variables for SOP analysis |
| lyngby_sop_main | lyngby_sop_main - Strother OPLS |
| lyngby_sopressvd | lyngby_sopressvd - SOP with SVD on the residual |
| lyngby_splitonoff | lyngby_splitonnoff - Function to find the indices of the on/off scans. |
| lyngby_spm_xyz2ind | lyngby_spm_xyz2ind - Convert SPM XYZ structure to voxel indices |
| lyngby_svd | lyngby_svd - Singular value decomposition |
| lyngby_svd_global | lyngby_svd_global - Global variables for SVD analysis |
| lyngby_svd_init | lyngby_svd_init - Initialize global variables for SVD analysis |
| lyngby_svdfilter | lyngby_svdfilter - Filtering by SVD |
| lyngby_swaporder | lyngby_swaporder - Swap the xyz order in a volume |
| lyngby_talaimg | lyngby_talaimg - Returns Talairach brain plot in the style of SPM |
| lyngby_test_fishersg | lyngby_test_fishersg - Test with Fisher's g |
| lyngby_test_wilrank | lyngby_test_wilrank - Wilcoxon sign rank test |
| lyngby_tmask2index | lyngby_tmask2index - Return time mask from indices |
| lyngby_ts_ftest | lyngby_ts_ftest - F-test for two samples. |
| lyngby_ts_global | lyngby_ts_global - Global variables for TS analysis method |
| lyngby_ts_init | lyngby_ts_init - Initialize globals for t-test analysis method |
| lyngby_ts_main | lyngby_ts_main - Whole volume Student's t-test for equal variances. |
| lyngby_ts_pttest | lyngby_ts_pttest - Student's paired t-test. |
| lyngby_ts_ttest | lyngby_ts_ttest - Two sample Student t test, equal variances. |
| lyngby_ts_uttest | lyngby_ts_uttest - Student's t-test for unequal variances. |
| lyngby_ui_baf2_init | lyngby_ui_baf2_init - Ardekani's nuisance F-test, init. of param. |
| lyngby_ui_baf_init | lyngby_ui_baf_init - Ardekani's F-test, GUI for init. of param. |
| lyngby_ui_bat_init | lyngby_ui_bat_init - Initialization for Ardekani's t-test |
| lyngby_ui_cc_init | lyngby_ui_cc_init - User interface for init. of cross-correlation |
| lyngby_ui_cc_view | lyngby_ui_cc_view - User interface for viewing Cross-correlation results |
| lyngby_ui_cons_init | lyngby_ui_cons_init - Initialization for Consensus modeling |
| lyngby_ui_credit | lyngby_ui_credit - Display a credit |
| lyngby_ui_efir_init | lyngby_ui_efir_init - UI for initialization of EFIR model |
| lyngby_ui_externals | lyngby_ui_externals - Window for editing/creating external |
| lyngby_ui_fir_init | lyngby_ui_fir_init - User interface for FIR filter analysis |
| lyngby_ui_global | lyngby_ui_global - Defines global for the user interface |
| lyngby_ui_ica_init | lyngby_ui_ica_init - GUI for initialization of ICA model |
| lyngby_ui_ikm_init | lyngby_ui_ikm_init - GUI for Iterative K-means initialization |
| lyngby_ui_km_init | lyngby_ui_km_init - GUI for K-means parameter initialization |
| lyngby_ui_ks_init | lyngby_ui_ks_init - KS, GUI for initialization of parameters |
| lyngby_ui_loadfile | lyngby_ui_loadfile - Opens a window for specifying file parameters |
| lyngby_ui_lz_init | lyngby_ui_lz_init - Lange-Zeger GUI init of parameters |
| lyngby_ui_lzgs_init | lyngby_ui_lzgs_init - Lange-Zeger GUI init of parameters |
| lyngby_ui_lzit_init | lyngby_ui_lzit_init - GUI for iterative Lange-Zeger initialization |
| lyngby_ui_main | lyngby_ui_main - Main function for the GUI for lyngby |
| lyngby_ui_message | lyngby_ui_message - Display a message |
| lyngby_ui_mkm_init | lyngby_ui_mkm_init - GUI for Meta K-means initialization |
| lyngby_ui_movie | lyngby_ui_movie - User interface for movie |
| lyngby_ui_nnr_init | lyngby_ui_nnr_init - User interface for NNR method |
| lyngby_ui_nns_init | lyngby_ui_nns_init - GUI for Neural network saliency |
| lyngby_ui_option | lyngby_ui_option - Option/setup for user interface |
| lyngby_ui_para_draw | lyngby_ui_para_draw - User interface for paradigm viewing (and specification) |
| lyngby_ui_paradigm | lyngby_ui_paradigm - User interface for paradigm viewing and editing |
| lyngby_ui_pois_init | lyngby_ui_pois_init - GUI, Poisson filter, initialization |
| lyngby_ui_preproc | lyngby_ui_preproc - UI for setting up preprocessing parameters |
| lyngby_ui_preproc_detrend | lyngby_ui_preproc_detrend - UI for setting up preprocessing parameters |
| lyngby_ui_preproc_dtplot | lyngby_ui_preproc_dtplot - User interface for time mask specification |
| lyngby_ui_preproc_dummy | lyngby_ui_preproc_dummy - UI for setting up preprocessing parameters |
| lyngby_ui_preproc_normalize | lyngby_ui_preproc_normalize - UI for setting up preprocessing parameters |
| lyngby_ui_resinfo | lyngby_ui_resinfo - Defines global for the user interface |
| lyngby_ui_run | lyngby_ui_run - User interface for run viewing/specification |
| lyngby_ui_run_no | lyngby_ui_run_no - User interface for run specification |
| lyngby_ui_saveresult | lyngby_ui_saveresult - Opens a window for specifying file parameters. |
| lyngby_ui_scva_init | lyngby_ui_scva_init - GUI for init of Strother CVA |
| lyngby_ui_sop_init | lyngby_ui_sop_init - GUI of init. of SOP model |
| lyngby_ui_svd_init | lyngby_ui_svd_init - GUI for initialization of SVD model |
| lyngby_ui_time | lyngby_ui_time - User interface for time mask specification |
| lyngby_ui_time_be | lyngby_ui_time_be - User interface for time mask specification |
| lyngby_ui_ts_init | lyngby_ui_ts_init - Initialization of t-test |
| lyngby_ui_view | lyngby_ui_view - User interface for viewing results |
| lyngby_ui_view_baf | lyngby_ui_view_baf - Viewing Ardekani F-test results |
| lyngby_ui_view_baf2 | lyngby_ui_view_baf2 - Viewing function for Ardekani's nuisance F |
| lyngby_ui_view_bat | lyngby_ui_view_bat - Viewing Ardekani t-test results |
| lyngby_ui_view_cc | lyngby_ui_view_cc - Viewing Cross-correlation results |
| lyngby_ui_view_cons | lyngby_ui_view_cons - Consensus viewing function |
| lyngby_ui_view_detrend | lyngby_ui_view_dfl - Detrended data viewing function |
| lyngby_ui_view_dfl | lyngby_ui_view_dfl - Default viewing function |
| lyngby_ui_view_efir | lyngby_ui_view_efir - Viewing Exhaustive FIR filter results |
| lyngby_ui_view_fir | lyngby_ui_view_fir - Viewing FIR filter results |
| lyngby_ui_view_ica | lyngby_ui_view_ica - ICA viewing function |
| lyngby_ui_view_ikm | lyngby_ui_view_ikm - Viewing Iterative K-means filter results |
| lyngby_ui_view_km | lyngby_ui_view_km - Viewing K-means filter results |
| lyngby_ui_view_ks | lyngby_ui_view_ks - Kolmogorov-Smirnov viewing function |
| lyngby_ui_view_lzgs | lyngby_ui_view_lzgs - Viewing Lange Zeger grid search results |
| lyngby_ui_view_lzit | lyngby_ui_view_lzit - Viewing Lange Zeger results |
| lyngby_ui_view_mkm | lyngby_ui_view_mkm - Viewing of meta K-means results |
| lyngby_ui_view_nnr | lyngby_ui_view_nnr - Viewing NNR filter results |
| lyngby_ui_view_nns | lyngby_ui_view_nns - Viewing of NNS results |
| lyngby_ui_view_pois | lyngby_ui_view_pois - Viewing poisson filter results |
| lyngby_ui_view_scva | lyngby_ui_view_scva - Viewing function for Strother CVA |
| lyngby_ui_view_sop | lyngby_ui_view_sop - Viewing for Strother OPLS |
| lyngby_ui_view_svd | lyngby_ui_view_svd - Viewing for Strother OPLS |
| lyngby_ui_view_ts | lyngby_ui_view_ts - t-test viewing function |
| lyngby_ui_viewvol | lyngby_ui_viewvol - View full volume timeserie and specify ROI and voxelmask |
| lyngby_ui_volume | lyngby_ui_volume - View full volume timeserie and specify mask |
| lyngby_ui_voxelmask | lyngby_ui_voxelmask - User interface for voxelmask editing |
| lyngby_uis_baf | lyngby_uis_baf - Script executed for Ardekani's F-test |
| lyngby_uis_baf2 | lyngby_uis_baf2 - Script executed for Ardekani's nuisance F |
| lyngby_uis_baf2_v | lyngby_uis_baf2_v - Script for Arkani's F-test with nuisance view |
| lyngby_uis_baf_v | lyngby_uis_baf_v - Script for Ardekani F-test view |
| lyngby_uis_bat | lyngby_uis_bat - Script executed for Ardekani's t-test |
| lyngby_uis_bat_v | lyngby_uis_bat_v - Script for Ardekani't t-test view |
| lyngby_uis_cc | lyngby_uis_cc - Script executed for cross-correlation anal. |
| lyngby_uis_cc_v | lyngby_uis_cc_v - Script for cross-correlation view |
| lyngby_uis_cons | lyngby_uis_cons - Script executed for consensus |
| lyngby_uis_cons_v | lyngby_uis_cons_v - Script for Consensus viewing |
| lyngby_uis_efir | lyngby_uis_efir - Script executed at the EFIR analysis |
| lyngby_uis_efir_v | lyngby_uis_efir_v - Script for 'exhaustive FIR' viewing |
| lyngby_uis_fir | lyngby_uis_fir - Script executed at the FIR analysis |
| lyngby_uis_fir_v | lyngby_uis_fir_v - Script for FIR view |
| lyngby_uis_ica | lyngby_uis_ica - Script executed for ICA |
| lyngby_uis_ica_v | lyngby_uis_ica_v - Script for ICA view |
| lyngby_uis_ikm | lyngby_uis_ikm - Script executed for iterative K-means |
| lyngby_uis_ikm_v | lyngby_uis_ikm_v - Script for Iterative K-means view |
| lyngby_uis_km | lyngby_uis_km - Script executed for K-means analysis |
| lyngby_uis_km_v | lyngby_uis_km_v - Script for K-means view |
| lyngby_uis_ks | lyngby_uis_ks - Script executed for Kolmogorov-Smirnoff |
| lyngby_uis_ks_v | lyngby_uis_ks_v - Script for Kolmogorov-Smirnov view |
| lyngby_uis_lzgs | lyngby_uis_lzgs - Script executed for Lange-Zeger Grid Search |
| lyngby_uis_lzgs_v | lyngby_uis_lzgs_v - Script for Lange-Zeger gridsearch view |
| lyngby_uis_lzit | lyngby_uis_lzit - Script executed for Lange-Zeger, Iterative |
| lyngby_uis_lzit_v | lyngby_uis_lzit_v - Script for Lange-Zeger 'iterative' view |
| lyngby_uis_mkm | lyngby_uis_mkm - Script executed for Meta K-means analysis |
| lyngby_uis_mkm_v | lyngby_uis_mkm_v - Script for Meta K-means viewing |
| lyngby_uis_nnr | lyngby_uis_nnr - Script executed for Neural network regression |
| lyngby_uis_nnr_v | lyngby_uis_nnr_v - Script for neural network regression view |
| lyngby_uis_nns | lyngby_uis_nns - Script executed for Neural network saliency |
| lyngby_uis_nns_v | lyngby_uis_nns_v - Script for neural network saliency view |
| lyngby_uis_none_v | lyngby_uis_none_v - Script for 'original' view |
| lyngby_uis_pois | lyngby_uis_pois - Script executed for Poisson filter analysis |
| lyngby_uis_pois_v | lyngby_uis_pois_v - Script for Poisson filter view |
| lyngby_uis_pp_detrend_v | lyngby_uis_pp_detrend_v - Script for viewing of detrended data |
| lyngby_uis_scva | lyngby_uis_scva - Script executed for SCVA analysis |
| lyngby_uis_scva_v | lyngby_uis_scva_v - Script for SCVA view |
| lyngby_uis_sop | lyngby_uis_sop - Script executed for SOP analysis |
| lyngby_uis_sop_v | lyngby_uis_sop_v - Script for SOP view |
| lyngby_uis_svd | lyngby_uis_svd - Script executed for SVD analysis |
| lyngby_uis_svd_v | lyngby_uis_svd_v - Script for SVD view |
| lyngby_uis_ts | lyngby_uis_ts - Script executed for t-test analysis |
| lyngby_uis_ts_v | lyngby_uis_ts_v - Script for t-test view |
| lyngby_vmask2index | lyngby_vmask2index - Return Indices from voxel mask |
| lyngby_write_ana | lyngby_write_ana - Write a volume to ANALYZE files |
| lyngby_write_sdt | lyngby_write_sdt - Write a volume/datamatrix to SDT/SPR file |
| lyngby_write_vapet | lyngby_write_vapet - Write a volume to VAPET file |
| lyngby_write_volumes | lyngby_write_volumes - Write volumes to file |
| lyngby_xcorr | lyngby_xcorr - Cross correlation/covariance |
Master index