[Master Index]
Index for export/brede
Produced by mat2html on Fri Jun 20 17:43:05 2008
Cross-Directory links are: OFF
Matlab files in this Directory
brede brede - Main function
brede_air brede_air - Roger Woods AIR file
brede_bdb brede_bdb - Read and store Brede database
brede_bib brede_bib - Overview of 'bib' function'
brede_bib_ac2bib brede_bib_ac2bib - Convert Academic Press to Bib struct
brede_bib_asymmetry brede_bib_asymmetry - Compute asymmetry for 'bib'
brede_bib_author2authorbrede_bib_author2author - Convert author field in 'bib' structure
brede_bib_author2txtbrede_bib_author2txt - Convert author field in 'bib' structure to text
brede_bib_authors2htmlbrede_bib_authors2html - Convert authors to HTML
brede_bib_bib2bib brede_bib_bib2bib - Regularize Bib structure
brede_bib_bib2bibtexbrede_bib_bib2bibtex - Convert 'bib' structure to BibTeX
brede_bib_bib2citekeybrede_bib_bib2citekey - Generate BibTeX key from 'bib' structure
brede_bib_bib2exp brede_bib_bib2exp - Convert 'bib' structure to 'exp' structure
brede_bib_bib2html brede_bib_bib2html - Convert 'Bib' structure to HTML
brede_bib_bib2html_authorbrede_bib_bib2html_author - Write author index to HTML file
brede_bib_bib2html_fmridcidbrede_bib_bib2html_fmridcid - Index for Hammers field
brede_bib_bib2html_statbrede_bib_bib2html_stat - Generate HTML with descriptive statistics
brede_bib_bib2loc brede_bib_bib2loc - Convert 'bib' to 'loc'
brede_bib_bib2mat brede_bib_bib2mat - Generate matrix from 'Bib' structure
brede_bib_bib2pmid brede_bib_bib2pmid - Get Pubmed PMID from bib structure
brede_bib_bib2str brede_bib_bib2str - Convert 'bib' to string.
brede_bib_bib2tex brede_bib_bib2tex - Construct LaTeX from 'bib' structure
brede_bib_bib2vcard brede_bib_bib2vcard - Convert bib structure to vCard
brede_bib_bib2vol brede_bib_bib2vol - Convert a 'bib' structure to a 'vol'
brede_bib_cell2structbrede_bib_cell2struct - Convert 'Bib' cell arrays to structures
brede_bib_getfield brede_bib_getfield - Get a field from a 'Bib' structure
brede_bib_journal2journalbrede_bib_journal2journal - Convert journal field in 'bib' structure
brede_bib_medline2bibbrede_bib_medline2bib - Convert MEDLINE string to Bib struct
brede_bib_merge brede_bib_merge - Merge 2 bibliographies
brede_bib_pmid2wobibbrede_bib_pmid2wobib - Convert PMID to WOBIB identifier if possible
brede_bib_ref2bib brede_bib_ref2bib - String containing a reference to bib
brede_bib_select brede_bib_select - Select fields or 'bib' structures
brede_bm brede_bm - Functions related to BrainMap
brede_bm_correct_expbrede_bm_correct_exp - Correct the BrainMap database
brede_bm_exp2exp brede_bm_exp2exp - Parse string to get BrainMap Experiment
brede_bm_expbib2exp brede_bm_expbib2exp - Merge exp and bib information
brede_bm_get_exp brede_bm_get_exp - Get BrainMap experiment from the web
brede_bm_get_loc brede_bm_get_loc - Get BrainMap location
brede_bm_get_paper brede_bm_get_paper - Get BrainMap paper
brede_bm_paper2abstrbrede_bm_paper2abstr - Get abstract from BrainMap paper
brede_bm_paper2bib brede_bm_paper2bib - Parse string to Get BrainMap paper
brede_bm_url brede_bm_url - Return BrainMap URL for a paper, eksp. or loc.
brede_bt_get_entry brede_bt_get_entry - Get entries from BibTeX file
brede_cdf brede_cdf - Cumulative distribution
brede_cdf_bin brede_cdf_bin - Binomial distribution function
brede_cdf_chi2 brede_cdf_chi2 - CDF for chi2-distriibution
brede_cdf_f brede_cdf_f - Fisher's F distribution
brede_cdf_gauss brede_cdf_gauss - Gaussian (normal) distribution function
brede_cdf_gaussianratiobrede_cdf_gaussianratio - Gaussian ratio distribution
brede_cdf_hypergeo brede_cdf_hypergeo - Hypergeometric density distribution
brede_cdf_lta2twotailedbrede_pdf_lta2twotailed(pin) - Convert one-tailed to two-tailed
brede_cdf_ncf brede_cdf_ncf - Fisher's singly noncentral F distribution
brede_cdf_r brede_cdf_r - Correlation coefficient for distribution function
brede_cdf_rank brede_cdf_rank - Compute lower tail area for rank
brede_cdf_t brede_cdf_t - Student t distribution
brede_cel brede_cel - Functions for 'cel' structures
brede_cel_cel2cel brede_cel_cel2cel - Convert to canonical form of cell
brede_cel_cel2mat brede_cel_cel2mat - Convert 'cel' to 'mat' structure
brede_cel_genotype2matbrede_cel_genotype2mat - Generate 'mat' structure from genotype
brede_cel_subcell brede_cel_subcell - Take out part of cel structure
brede_cel_transpose brede_cel_transpose - Transpose a 'Cel' structure
brede_cocomac_connectivity2matbrede_cocomac_connectivity2mat - Convert CoCoMac Structure
brede_cra_est brede_cra_est - Canonical ridge estimation
brede_exp brede_exp - Overview over 'exp' functions
brede_exp_cat brede_exp_cat - Concatenate two 'exp' structures
brede_exp_exp2exp brede_exp_exp2exp - Regularize experiemnt structure
brede_exp_exp2html brede_exp_exp2html - Write 'exp' structures to HTML files
brede_exp_exp2html_statbrede_exp_exp2html_stat - Generate HTML with descriptive statistics
brede_exp_exp2loc brede_exp_exp2loc - Convert 'exp' to 'loc'
brede_exp_exp2mat brede_exp_exp2mat - Generate matrix from 'Exp' structure
brede_exp_exp2str brede_exp_exp2str - Convert 'exp' structure to string
brede_exp_exp2tex brede_exp_exp2tex - Convert 'exp' structure to LaTeX
brede_exp_exp2vol brede_exp_exp2vol - Generate volumes from 'Exp' structure
brede_exp_extract brede_exp_extract - Extract experiment
brede_exp_getfield brede_exp_getfield - Get a field from a 'Exp' structure
brede_exp_outlier brede_exp_outlier - Find outliers
brede_exp_query brede_exp_query - Query after 'exp' structures
brede_exp_select brede_exp_select - Select fields or 'exp' structures
brede_ext brede_ext - Overview of ext functions and structure
brede_ext_ext2html brede_ext_ext2html - Generate HTML from ext structures
brede_ext_ext2mat brede_ext_ext2mat - Convert 'ext' to 'mat' structure
brede_ext_ext2str brede_ext_ext2str - Convert 'ext' structure to string
brede_ext_getfield brede_ext_getfield - Get a field from a 'Ext' structure
brede_ext_woext2htmlbrede_ext_woext2html - WOEXT to HTML
brede_hash_func brede_hash_func - Hash function
brede_hb_cityscape brede_hb_cityscape - Construct hyperbrain VRML Cityscape
brede_hb_house brede_hb_house - Hyperbrain VRML House
brede_hb_person brede_hb_person - Hyperbrain VRML person
brede_hb_torus brede_hb_torus - Hyperbrain VRML Torus
brede_html_close_jernebrede_html_close_jerne - Close a HTML file in the jerne style
brede_html_list brede_html_list - Make a HTML with a list
brede_html_loc brede_html_loc - Write locations to a HTML file
brede_html_open_jernebrede_html_open_jerne - Open a file and write a "Jerne" header
brede_html_relvol brede_html_relvol - Construct HTML files with related volumes
brede_html_vol2html brede_html_vol2html - Construct HTML files with probability volumes
brede_ica_bs_est brede_ica_bs_est - Bell & Sejnowski ICA estimation
brede_ica_est brede_ica_est - Independent component analysis
brede_ica_nbs_est brede_ica_nbs_est - Non-symmetric Bell & Sejnowski ICA
brede_idf_chi2 brede_idf_chi2 - IDF for chi2-distriibution
brede_idf_gauss brede_idf_gauss - Inverse cumulated Gaussian distribution
brede_jou_wojou2bib brede_jou_wojou2bib - WOJOU identifier to 'bib' structure
brede_loc brede_loc - Overview of 'Loc' structure functions
brede_loc_asymmetry brede_loc_asymmetry - Generate an asymmetry index
brede_loc_coord2url brede_loc_coord2url - Generate URL from coordinate
brede_loc_dist_hausdorffbrede_loc_dist_hausdorff - Hausdorff distance between two point sets
brede_loc_dist_minminbrede_loc_dist_minmin - Minmin distance between two point sets
brede_loc_hulllevel brede_loc_hulllevel - Hull level of 'loc' structures
brede_loc_label brede_loc_label - Label locations
brede_loc_loc2coord brede_loc_loc2coord - Return coordinates from loc structure
brede_loc_loc2exp brede_loc_loc2exp - Convert 'loc' to 'exp' structure
brede_loc_loc2html brede_loc_loc2html - Write locations to HTML file
brede_loc_loc2html_statbrede_loc_loc2html - Write locations to HTML file
brede_loc_loc2loc brede_loc_loc2loc - Convert location structure to location
brede_loc_loc2mat brede_loc_loc2mat - Convert 'loc' to 'mat' structure
brede_loc_loc2tex brede_loc_loc2tex - Loc structure to LaTeX
brede_loc_loc2vol brede_loc_loc2vol - Generate volume from locations
brede_loc_loc2wptemplatebrede_loc_loc2wptemplate - Wikipedia template from loc structure
brede_loc_mat2loc brede_loc_mat2loc - Convert matrix to Location structure.
brede_loc_mean brede_loc_mean - Mean coordinate
brede_loc_median brede_loc_median - Median of coordinates in 'loc' structure
brede_loc_nearestlocbrede_loc_nearestloc - Find the nearest locations
brede_loc_query brede_loc_query - Query after 'loc' structures
brede_loc_select brede_loc_select - Select fields or 'loc' structures
brede_loc_symmetrizebrede_loc_symmetrize - Symmetrize (mirror in the x) locations
brede_loc_test_equalbrede_loc_test_equal - Test if 'loc' structures are equal
brede_loc_test_gaussianbrede_loc_test_gaussian - Test for gaussianity
brede_loc_vol brede_loc_vol - Generate volume from locations
brede_loc_xform brede_loc_xform - Transform a set of coordinates
brede_make brede_make - Function to compile the mex functions
brede_mat brede_mat - Overview over 'mat' functions
brede_mat_2mat2html brede_mat_2mat2html - Convert two matrices to HTML
brede_mat_abs brede_mat_abs - Row and column abs of matrix
brede_mat_add brede_mat_add - Add two matrices from 'Mat' structures
brede_mat_ascendantsbrede_mat_ascendants - Find ascendants
brede_mat_assignmentbrede_mat_assignment - Matching a bipartite graph'(Hungarian method)
brede_mat_binarize brede_mat_binarize - Binarize
brede_mat_cat brede_mat_cat - Concatenate two matrix structures
brede_mat_cat_columnsbrede_mat_cat_columns - Concatenate columns in matrix structures
brede_mat_cat_interceptbrede_mat_cat_intercept - Add a column with 'ones' to a matrix
brede_mat_cca brede_mat_cca - Canonical correlation analysis
brede_mat_center brede_mat_center - Centering of a 'mat' structure
brede_mat_clustercoefbrede_mat_clustercoef - Cluster coefficient
brede_mat_concordancebrede_mat_concordance - Lin's concordance correlation coefficient
brede_mat_conncomp brede_mat_conncomp - Find connected components
brede_mat_corrcoef brede_mat_corrcoef - Correlation coefficient
brede_mat_cov brede_mat_cov - Covariance matrix
brede_mat_cumsum brede_mat_cumsum - Cumulated sum
brede_mat_density brede_mat_density - Density of a matrix
brede_mat_descendantsbrede_mat_descendants - Find descendants
brede_mat_digamma brede_mat_digamma - Digamma function
brede_mat_dist brede_mat_dist - Distance between objects
brede_mat_divide brede_mat_divide - Element-wise divide
brede_mat_elemproductbrede_mat_elemproduct - MElement-wise matrix product
brede_mat_elimsinglebrede_mat_elimsingle - Eliminate columns with single instances
brede_mat_elimstop brede_mat_elimstop - Eliminate stop words
brede_mat_elimzero brede_mat_elimzero - Eliminate columns with zero instances
brede_mat_fowlkesmallowsbrede_mat_fowlkesmallows - Compute Fowlkes Mallows similarity
brede_mat_getfield brede_mat_getfield - Get a field from a 'Mat' structure
brede_mat_getrows brede_mat_getrows - Get rows from 'mat' structures
brede_mat_glm brede_mat_glm - General linear model
brede_mat_glm_est brede_mat_glm_est - General linear model estimation
brede_mat_glm_testablebrede_mat_glm_testable - Test is a certain contrast is testable
brede_mat_hkmc brede_mat_hkmc - K-means clustering
brede_mat_hnmf brede_mat_hnmf - Hierarchical NMF
brede_mat_hubauthoritybrede_mat_hubauthority - Hub and authority for a matrix
brede_mat_hulllevel brede_mat_hulllevel - Hull level of vertices
brede_mat_ibfa brede_mat_ibfa - Interbattery analysis
brede_mat_ica brede_mat_ica - Independent component analysis
brede_mat_icc brede_mat_icc - Intraclass correlation coefficient
brede_mat_impute brede_mat_impute - Imputation
brede_mat_inv brede_mat_inv - Inverse of matrix
brede_mat_iproduct brede_mat_iproduct - Inner product of 'mat' structures
brede_mat_isnan brede_mat_isnan - isnan for 'mat' structures
brede_mat_kmc brede_mat_kmc - K-means clustering
brede_mat_knn brede_mat_knn - k nearest neighbor
brede_mat_kummer brede_mat_kummer - Kummer's confluent hypergeometric function
brede_mat_lad_est brede_mat_lad_est - Least absolute deviation estimation
brede_mat_loganplot brede_mat_loganplot - Logan plot analysis
brede_mat_mat2cel brede_mat_mat2cel - Convert 'mat' structure to 'cel' structure
brede_mat_mat2html brede_mat_mat2html - Convert 'mat' structure to HTML
brede_mat_mat2loc brede_mat_mat2loc - Convert 'mat' structure to 'loc' structures'
brede_mat_mat2mat brede_mat_mat2mat - Convert or clean matrix
brede_mat_mat2str brede_mat_mat2str - Generate a string for a 'mat' structure
brede_mat_mat2tex brede_mat_mat2html - Convert 'mat' structure to TeX
brede_mat_mat2vol brede_mat_mat2vol - Convert 'mat' to 'vol' structure
brede_mat_match brede_mat_match - Match columns or rows of two matrices
brede_mat_mean brede_mat_mean - Mean of matrix
brede_mat_minus brede_mat_minus - Subtract a matrix from another
brede_mat_mma brede_mat_mma - Multinomial mixture analysis
brede_mat_mrtm brede_mat_mrtm - Ichise's MRTM analysis
brede_mat_mutualinfobrede_mat_mutualinfo - Mutual information
brede_mat_nls_est brede_mat_nls_est - Non-negative least squares estimation
brede_mat_nlsb_est brede_mat_nlsb_est - Non-negative least squares estimation
brede_mat_nmf brede_mat_nmf - Non-negative matrix factorization
brede_mat_novelty brede_mat_novelty - Novelty/outlierness for matrix
brede_mat_ones brede_mat_ones - 'Mat' structure with ones
brede_mat_onmf brede_mat_onmf - Orthogonal non-negative matrix factorization
brede_mat_oproduct brede_mat_oproduct - Inner product of 'mat' structures
brede_mat_orthopcaspacebrede_mat_orthopcaspace - Remove PCA-subspace
brede_mat_orthospacebrede_mat_orthospace - Projection onto the orthogonal subspace
brede_mat_partcorrcoefbrede_mat_partcorrcoef - Correlation coefficient
brede_mat_partcorrcoef_testbrede_mat_partcorrcoef_test - Correlation coefficient
brede_mat_partcorrcoef_tvaluebrede_mat_partcorrcoef_tvalue - T-value for partial correlation
brede_mat_pcr_est brede_mat_pcr_est - Principal component regression estimation
brede_mat_permute brede_mat_permute - Permute rows of matrix
brede_mat_plot_bullseyebrede_mat_plot_bullseye - Bullseye plot of 'Mat' structure
brede_mat_plot_clusterbushbrede_mat_plot_clusterbush - Plot a hierarchy of clusters
brede_mat_plot_countbrede_mat_plot_count - Plot row or columns summeratization
brede_mat_plot_linesbrede_mat_plot_lines - Plot matrix elements as lines
brede_mat_plot_mds brede_mat_plot_mds - Multidimensional scaling for 'Mat' structure
brede_mat_plot_partcorrcoef_evolvebrede_mat_plot_partcorrcoef_evolve - Plot of evolution of correlation
brede_mat_plot_path brede_mat_plot_path - Plot paths between two nodes.
brede_mat_plot_targ brede_mat_plot_targ - 'Target Sociogram' plot of 'Mat' structure
brede_mat_product brede_mat_product - Multiply two matrices from 'Mat' structures
brede_mat_rankindicatorbrede_mat_rankindicator - Construct a 'rank indicator' matrix
brede_mat_reconerrorbrede_mat_reconerror - Reconstruction error for a matrix
brede_mat_roc brede_mat_roc - Receiver operating Characteristics (ROC)
brede_mat_rows2strs brede_mat_rows2strs - Convert rows to strings
brede_mat_scale brede_mat_scale - Scale a matrix
brede_mat_sem brede_mat_sem - Structural equations modeling
brede_mat_sem_aic brede_mat_sem_aic - AIC for structural equation model
brede_mat_sem_bic brede_mat_sem_bic - BIC for structural equation model
brede_mat_sem_grow brede_mat_sem_grow - Grow structural equation model
brede_mat_sem_loglikelihoodbrede_mat_sem_loglikelihood - Log-likelihood for structural equation
brede_mat_skewness brede_mat_skewness - Skewness
brede_mat_sort brede_mat_sort - Sort rows or columns
brede_mat_std brede_mat_std - Std of matrix
brede_mat_submatrix brede_mat_submatrix - Pick out submatrix
brede_mat_sum brede_mat_sum - Row and column sum of matrix
brede_mat_svd brede_mat_svd - Singular value decomposition
brede_mat_transpose brede_mat_transpose - Transpose a 'Mat' structure
brede_mat_wta brede_mat_wta - Winner takes all
brede_nmf_cost_div brede_nmf_cost_div - NMF divergence costfunction
brede_nmf_cost_eucl brede_nmf_cost_eucl - NMF euclidean cost
brede_nmf_est brede_nmf_est - Non-negative matrix factorization
brede_opt_cg brede_opt_cg - Rasmussen/Goutte's conjugate gradient minimization
brede_opt_gradient brede_opt_gradient - Optimization with Gradient minimization
brede_pde brede_pde - Probability density estimation
brede_pde_binmix brede_pde_binmix - Estimation of binomial mixture model
brede_pde_binmix_derbrede_pde_binmix_der - Derivative of the binomial mixture
brede_pde_binmix_ll brede_pde_binmix_ll - Loglikelihood of mixture of binomials
brede_pde_specht brede_pde_specht - Specht Kernel evaluation
brede_pde_spechtest brede_pde_spechtest - Estimation of the kernel width for Specht
brede_pde_spechtlp brede_pde_spechtlp - Specht Kernel logarithmic probability
brede_pdf_bin brede_pdf_bin - Binomial probability density function
brede_pdf_binmix brede_pdf_binmix - Probability density for binomial mixture
brede_pdf_cauchy brede_pdf_cauchy - PDF of multivariate Cauchy-distribution
brede_pdf_chi2 brede_pdf_chi2 - PDF of chi2-distriibution
brede_pdf_gauss brede_pdf_gauss - Gaussian probability density
brede_pdf_gaussianratiobrede_pdf_gaussianratio - Gaussian ratio distribution
brede_pdf_hypergeo brede_pdf_hypergeo - Hypergeometric density distribution
brede_pdf_nig brede_pdf_nig - Normal inverse gamma probability density
brede_pdf_t brede_pdf_t - PDF of multivariate t-distribution
brede_per brede_per - Overview of function for 'per' structure
brede_per_per2html brede_per_per2html - Convert 'per' structure to HTML
brede_plot brede_plot - Plot functions of brede
brede_plot_set_fontsizebrede_plot_set_fontsize - Set fontsize for plot
brede_plot_wordfreq brede_plot_wordfreq - Plot word frequency
brede_plot_wordsvd brede_plot_wordsvd - Plot singular vector from SVD of word matrix
brede_re_match brede_re_match - Regular expresssion matching
brede_read brede_read - Overview of file reading functions
brede_read_air brede_read_air - Read Roger Woods AIR file
brede_read_amat brede_read_amat - Read in Antonia Hamiliton's AMAT database
brede_read_analyze brede_read_analyze - Reads an ANALYZE file
brede_read_analyze4dbrede_read_analyze4d - Reads 4 dimensional ANALYZE file
brede_read_bibtex brede_read_bibtex - Read BIBTeX file
brede_read_csv2cel brede_read_csv2cel - Read file for cel structure
brede_read_csv2loc brede_read_csv2loc - Read locations from a comma separated
brede_read_csv2mat brede_read_csv2mat - Read comma separated file to 'mat' structure
brede_read_guessfiletypebrede_read_guessfiletype - Try to guess the filetype
brede_read_nifti1 brede_read_nifti1 - Reads an NIfTI-1 file
brede_read_off brede_read_off - Read an OFF file
brede_read_rawicbm brede_read_rawicbm - Reads a file containing a volume.
brede_read_spm_eegtemplatebrede_read_spm_eegtemplate - Read SPM5 EEGtemplates
brede_read_spm_gray brede_read_spm_gray - Read SPM's apriori gray volume from SPM
brede_read_spm_mat brede_read_spm_mat - Read SPM .mat transformation matrix
brede_read_spm_sn_affinebrede_read_spm_sn_affine - Read SPM transformation matrix from 'sn'
brede_read_txtlines brede_read_txtlines - Read file with text lines
brede_read_txtmatrixbrede_read_txtmatrix - Read a 'Mat' structure from text files.
brede_read_txttable brede_read_txttable - Read file with text table
brede_read_vapet3d brede_read_vapet3d - Read a VAPET volume file
brede_read_volumes brede_read_volumes - Read volume files
brede_read_xls2cel brede_read_xls2cel - Read Excel XLS file to a 'cel' structure
brede_read_xml brede_read_xml - Read XML file into structure
brede_read_xml2vol brede_read_xml2vol - Read a XML file with a volume
brede_read_xml_cocomacbrede_read_xml_cocomac - Read CoCoMac XML file
brede_roi brede_roi - Over of ROI functions
brede_roi_roi2html brede_roi_roi2html - Convert 'roi' structure to HTML
brede_roi_roi2html_alphabrede_roi_roi2html_alpha - Alphabetic index for 'roi' field
brede_roi_roi2html_hambrede_roi_roi2html_ham - Index for Hammers field
brede_roi_roi2html_svarerbrede_roi_roi2html_svarer - Index for Svarer field in 'roi'
brede_roi_roi2html_tzourbrede_roi_roi2html_tzour - Index for Tzourio-Mazoyer field in 'roi'
brede_roi_roi2mat brede_roi_roi2mat - Convert 'roi' structures to 'mat' structure
brede_roi_roi2names brede_roi_roi2names - Get names for ROI
brede_roi_roi2str brede_roi_roi2str - Convert 'roi' structure to string
brede_roi_roi2tex brede_roi_roi2tex - Construct LaTeX from 'roi' structure
brede_roi_tzour2roi brede_roi_tzour2roi - Find/convert Tzourio-Mazoyer AAL identifier
brede_roi_woroi2loc brede_roi_woroi2loc - Get location for brain region
brede_roi_woroi2roi brede_roi_woroi2roi - Get 'Roi' for a WOROI identifier
brede_spm2_table2locbrede_spm2_table2loc - Convert result table to locations
brede_spm99_table2locbrede_spm99_table2loc - Convert result table to locations
brede_stereo_anagl brede_stereo_anagl - Make anaglyph stereoscopy image
brede_str brede_str - Overview of string functions
brede_str_author2authorbrede_str_author2author - Parse string with authors
brede_str_charfrq brede_str_charfrq - Character frequency
brede_str_clean brede_str_clean - 'Clean' string
brede_str_date brede_str_date - Return date with ISO formatting
brede_str_deblank brede_str_deblank - Removes starting and trailing whitespace
brede_str_dehtml brede_str_dehtml - Remove HTML markup from string.
brede_str_elimstop brede_str_elimstop - Eliminate stop words
brede_str_erase brede_str_erase - Erase a substring in a string
brede_str_google2urlsbrede_str_google2urls - Extract URLs from the Google search result
brede_str_html2str brede_str_xml2str - Deescape xml
brede_str_lix brede_str_lix - String: lix
brede_str_ngram brede_str_ngram - N-gram
brede_str_pdf2txt brede_str_pdf2txt - Convert PDF file to text
brede_str_phrasefrq brede_str_phrasefrq - Compute phrase frequency
brede_str_plot_chfr brede_str_plot_chfr - Plot character frequency
brede_str_plot_phrasefrqbrede_str_plot_phrasefrq - Plot phrase frequency
brede_str_ps2txt brede_str_ps2txt - Convert a PostScript file to a text file.
brede_str_split brede_str_split - Split a string into substring
brede_str_splitkey brede_str_splitkey - Split keyword string into words matrix
brede_str_splitword brede_str_splitword - Split string into words
brede_str_str2alphanumbrede_str_str2alphanum - Maintain only alphanumeric characters
brede_str_str2bib brede_str_str2bib - Convert string to bib
brede_str_str2html brede_str_str2html - Convert string to HTML
brede_str_str2mat brede_str_str2mat - Convert string into a 'Mat' structure
brede_str_str2mat_wordbigrambrede_str_str2mat_wordbigram
brede_str_str2woroi brede_str_str2woroi - Try to convert a string to a WOROI
brede_str_ucfirst brede_str_ucfirst - Upper case first letter
brede_str_wordstem brede_str_wordstem - Stem the words of a string
brede_str_wptemplate2structbrede_str_wptemplate2struct - Wikipedia template to structure
brede_struct brede_struct - Function for structures
brede_struct_array2cellbrede_struct_array2cell - Convert structure as array to cell array
brede_struct_field2cellstrbrede_struct_field2cellstr - Convert field to cellstr
brede_struct_field2numbrede_struct_field2num - Convert field to number
brede_struct_field2numsbrede_struct_field2nums - Convert field to number
brede_struct_field2strbrede_struct_field2str - Convert field to cellstr
brede_struct_fieldnamesbrede_struct_fieldnames - Return fieldnames
brede_struct_getelementbrede_struct_getelement - Get element from a field.
brede_struct_guesstypebrede_struct_guesstype - Try to guess type of structure
brede_struct_select brede_struct_select - Select fields from structures
brede_struct_struct2strbrede_struct_struct2str - Convert structure to string
brede_sur brede_sur - Overview of 'sur' structure and functions
brede_sur_area brede_sur_area - Measure the area of a surface
brede_sur_color brede_sur_color - Generate color for surface
brede_sur_connectivitybrede_sur_connectivity - Connectivity matrix
brede_sur_convhull brede_sur_convhull - Convex hull for a surface
brede_sur_cube brede_sur_cube - Construct a cube in a 'sur' structure
brede_sur_curvature brede_sur_curvature - Curvature of a surface
brede_sur_dist brede_sur_dist - Distance to surface
brede_sur_drury brede_sur_drury - Return Drury cortex surface
brede_sur_flatten brede_sur_flatten - Flatten surface
brede_sur_hulllevel brede_sur_hulllevel - Hull level of vertices
brede_sur_octahedronbrede_sur_octahedron - Construct a octahedron in a 'sur' structure
brede_sur_reduce brede_sur_reduce - Reduce surface
brede_sur_refine brede_sur_refine - Refine surface
brede_sur_scalevert brede_sur_scale - Scale vertices in 'sur' structure
brede_sur_smoothvertbrede_sur_smoothvert - Smooth position of vertices
brede_sur_sphere brede_sur_sphere - Construct a sphere in a 'sur' structure
brede_sur_subsurfacebrede_sur_subsurface - Extract sub-surface
brede_sur_sur2mat brede_sur_sur2mat - Convert 'sur' structure to 'mat'
brede_sur_tetrahedronbrede_sur_tetrahedron - Construct a tetrahedron in a 'sur' structure
brede_sur_triangularizebrede_sur_triangularize - Triangularize mesh
brede_sur_unfold brede_sur_unfold - Unfold a surfaces
brede_svd_est brede_svd_est - Singular value decomposition
brede_svd_test brede_svd_test - Test for principal components.
brede_ta2 brede_ta2 - Overview of 2D plotting function
brede_ta2_axis brede_ta2_axis - Control axis scaling
brede_ta2_concortex brede_ta2_concortex - Construct 3D Talairach contours of cortex
brede_ta2_digitize brede_ta2_digitize - Interactive digitization in Talairach
brede_ta2_frame brede_ta2_frame - Frame for 2D Talairach plot
brede_ta2_grid brede_ta2_grid - Construct 2D Talairach grid
brede_ta2_loc brede_ta2_loc - Plot 'loc' in 2D Talairach space
brede_ta2_vol brede_ta2_vol - Plot volume in 2D slices
brede_ta3 brede_ta3 - Overview of 'ta3' functions
brede_ta3_aal brede_ta3_aal - Display the AAL segmented images
brede_ta3_axes brede_ta3_axes - Construct 3D Talairach axes
brede_ta3_axlabel brede_ta3_axlabel - Construct 3D Talairach axes labels
brede_ta3_bib brede_ta3_bib - Plot a bib in 3D Talairach space
brede_ta3_brodnum brede_ta3_brodnum - Construct 3D Talairach Brodmann numbers
brede_ta3_concortex brede_ta3_concortex - Construct 3D Talairach contours of cortex
brede_ta3_contour brede_ta3_contour - Construct 3D Talairach contours
brede_ta3_drury brede_ta3_drury - Construct 3D Talairach Drury cortex surface
brede_ta3_exp brede_ta3_exp - Plot an exp in 3D Talairach space
brede_ta3_eyes brede_ta3_eyes - Construct 3D Talairach eyes
brede_ta3_frame brede_ta3_frame - Construct 3D Talairach Frame
brede_ta3_grid brede_ta3_grid - Construct 3D Talairach grid
brede_ta3_light brede_ta3_light - Setup light for Talairach display
brede_ta3_loc brede_ta3_loc - Construct 3D Talairach locations (points)
brede_ta3_mat brede_ta3_mat - Plot matrix in 3D corner cube environment
brede_ta3_movie brede_ta3_movie - Make a movie
brede_ta3_patch brede_ta3_patch - Construct 3D patch surface
brede_ta3_patchwall brede_ta3_patchwall - Construct 3D patch wall
brede_ta3_sur brede_ta3_sur - Plot a 'sur' surface in Talairach space
brede_ta3_sur_digitizebrede_ta3_sur_digitize - Digitization of surfaces
brede_ta3_tick brede_ta3_tick - Tick marks for Talairach
brede_ta3_view brede_ta3_view - Set viewpoint
brede_ta3_volslice brede_ta3_volslice - Construct 3D Talairach volume slices
brede_ta3_volsurf brede_ta3_volsurf - Construct 3D Talairach volume surface
brede_tal_concere brede_tal_concere - Return the contour of the cerebellum
brede_tex_list brede_tex_list - Make a LaTeX code with list
brede_ui brede_ui - Main graphical user interface
brede_ui_bib brede_ui_bib - UI for editing 'Bib' structure
brede_ui_bibs brede_ui_bibs - UI for editing 'Bibs' structure
brede_ui_cel brede_ui_cel - UI for viewing a 'cel' structure
brede_ui_exp brede_ui_exp - UI for editing 'Exp' structure
brede_ui_getfiles brede_ui_getfiles - UI for specifying filenames
brede_ui_loc brede_ui_loc - UI for editing 'Loc' structure
brede_ui_loc_init brede_ui_loc_init - UI for initialization of editing 'Loc' structure
brede_ui_mat brede_ui_mat - UI for viewing a 'Mat' structure
brede_ui_mat_partcorrcoefbrede_ui_mat_partcorrcoef - UI for partial correlation
brede_ui_roi brede_ui_roi - UI for editing 'Roi' structure
brede_ui_rois brede_ui_rois - UI for editing 'Rois' structure
brede_ui_sur brede_ui_sur - UI for viewing a 'Sur' structure
brede_ui_talspace_digitizebrede_ui_talspace_digitize - Digitize images from TalSpace
brede_ui_vol brede_ui_vol - UI for viewing a 'Vol' structure
brede_ui_vols brede_ui_vols - UI for viewing a 'Vol' structure
brede_url brede_url - Overview of URL functions
brede_url_braininfo brede_url_braininfo - Return URL to BrainInfo
brede_url_cocomacsitebrede_url_cocomacsite - Construct CocoMac Site URL
brede_url_doi brede_url_doi - Construct URL from DOI
brede_url_fmridcid brede_url_fmridcid - Construct a URL from a fMRI data center ID
brede_url_genesymbolbrede_url_genesymbol - URL for gene symbol
brede_url_ibvdname brede_url_ibvdname - Construct URL for IBVD name
brede_url_meshuid brede_url_meshuid - Generate URL to MeSH unique identifier
brede_url_neurondbprbrede_url_neurondbpr - Construct URL for SenseLab NeuronDB
brede_url_neurotreeidbrede_url_neurotreeid - Construct URL for NeuroTree Id
brede_url_omim brede_url_omim - Construct URL from OMIM
brede_url_pmid brede_url_pmid - Construct URL for Pubmed request
brede_url_whoicdten brede_url_whoicdten - Generate URL to WHO ICD-10 identifier
brede_url_wikipedia brede_url_wikipedia - Generate URL to MeSH unique identifier
brede_url_wobib brede_url_wobib - Construct URL from WOBIB
brede_url_woexp brede_url_woexp - Construct URL from WOEXP
brede_url_woext brede_url_woext - Construct URL from WOEXT
brede_url_woper brede_url_woper - Construct URL from WOPER
brede_url_woroi brede_url_woroi - Construct URL from WOROI
brede_ut_ismember brede_ut_ismember - More effecient implementation of ismember
brede_vhb_bkground brede_vhb_bkground - Construct VRML Hyperbrain Background
brede_vhb_close brede_vhb_close - Close a VRML Hyperbrain file
brede_vhb_house brede_vhb_house - Hyperbrain VRML House
brede_vhb_navigate brede_vhb_navigate - Construct VRML Hyperbrain NavigationInfo
brede_vhb_open brede_vhb_open - Open a VRML Hyperbrain file
brede_vhb_person brede_vhb_person - Hyperbrain VRML person
brede_vhb_torus brede_vhb_torus - VRML Hyperbrain Torus
brede_vhb_viewpoint brede_vta_viewpoint - Construct VRML Hyperbrain viewpoints
brede_vol brede_vol - Overview of volume functions
brede_vol_abs brede_vol_abs - Absolute value of voxel values
brede_vol_and brede_vol_and - Binary AND function on volumes
brede_vol_assign2labelbrede_vol_assign2label - Convert assignment to labeled 'vol'
brede_vol_binarize brede_vol_binarize - Binarize 'vol' structure
brede_vol_center brede_vol_center - Calculate center of volume
brede_vol_coactivatebrede_vol_coactivate - Find coactivation volume
brede_vol_density2probbrede_vol_density2prob - Convert density to probability volume
brede_vol_divide brede_vol_divide - Divide 'vol' structures
brede_vol_flood brede_vol_flood - Flooding operation on binary volume
brede_vol_gencoord brede_vol_gencoord - Generate coordinates for volumes
brede_vol_get_voxelvaluebrede_vol_get_voxelvalue - Get the voxel value from a 'vol'
brede_vol_glcm brede_vol_glcm - Grey level cooccurence matrix
brede_vol_loc brede_vol_loc - Find location (foci) in a volume
brede_vol_mask brede_vol_mask - Generate volume mask
brede_vol_mat2vol brede_vol_mat2vol - Convert vector/matrix to volume structure
brede_vol_mean brede_vol_mean - Mean over volumes
brede_vol_mirror brede_vol_mirror - Mirror volume
brede_vol_negate brede_vol_negate - Negate 'vol' structure
brede_vol_not brede_vol_not - Binary not function on volume
brede_vol_or brede_vol_or - Binary OR function on volumes
brede_vol_origin brede_vol_origin - Return origin of volume in 'vol' structure
brede_vol_plot_cumdistbrede_vol_plot_cumdist - Plot cumulative distribution function
brede_vol_plot_hist brede_vol_plot_hist - Plot histogram for 'vol' structure
brede_vol_plot_roc brede_vol_plot_roc - Plot ROC curve
brede_vol_product brede_vol_product - Product between volumes
brede_vol_range brede_vol_range - Find range of volume
brede_vol_regident brede_vol_regident - Region identification in a volume
brede_vol_register brede_vol_register - Image registration of volume(s)
brede_vol_resample brede_vol_resample - Resample the volume
brede_vol_scale brede_vol_scale - Scaling of a volume
brede_vol_smooth brede_vol_smooth - Smooth a volume
brede_vol_subtract brede_vol_subtract - Subtract one volume from an other
brede_vol_threshold brede_vol_threshold - Threshold volume
brede_vol_twosample brede_vol_twosample - Two-sample t-statistics
brede_vol_vol2exp brede_vol_vol2exp - A 'mat' structure from a 'exp' structure
brede_vol_vol2loc brede_vol_vol2loc - Find location (foci) in a volume
brede_vol_vol2mat brede_vol_vol2mat - A 'mat' structure from a 'vol' structure
brede_vol_vol2str brede_vol_vol2str - String for 'vol' structure
brede_vol_vol2sur brede_vol_vol2sur - Convert volume to surface
brede_vol_vol2vrml brede_vol_vol2vrml - Construct VRML surface from a volume
brede_vol_vols2html brede_vol_vols2html - Convert volumes to HTML
brede_vol_volumemeanbrede_vol_volumemean - Mean in volume
brede_vol_xform brede_vol_xform - Transform a 'vol' structure
brede_vol_zero brede_vol_zero - Mask zero volume (partially)
brede_vrml brede_vrml - Overview of VRML functions
brede_vrml_faceset brede_vrml_faceset - Construct VRML faceset or lineset
brede_vrml_open brede_vrml_open - Open a VRML file
brede_vrml_strimage brede_vrml_strimage - Convert string to VRML texture
brede_vrml_text brede_vrml_text - Write a text in VRML
brede_vrml_unique brede_vrml_unique - Return a unique identifier
brede_vrml_volplane brede_vrml_volplane - Construct VRML surface from a volume
brede_vrml_volsurf brede_vrml_volsurf - Construct VRML surface from a volume
brede_vta brede_vta - Generation of Talairach VRML files
brede_vta_1020elec brede_vta_1020elec - Construct VRML Talairach 10 20 electrodes
brede_vta_1020slice brede_vta_1020slice - Construct VRML Talairach 10 20 slices
brede_vta_aniview brede_vta_aniview - Construct VRML Talairach animated viewpoint
brede_vta_axes brede_vta_axes - Construct VRML Talairach axes
brede_vta_axlabel brede_vta_axlabel - Construct VRML Talairach axes labels
brede_vta_bib brede_vta_bib - Construct VRML Talairach model from Bib
brede_vta_bkground brede_vta_bkground - Construct VRML Talairach Background
brede_vta_brodnum brede_vta_brodnum - Construct VRML Talairach Brodmann numbers
brede_vta_close brede_vta_close - Close a VRML Talairach file
brede_vta_contour brede_vta_contour - Construct VRML Talairach contour
brede_vta_dipole brede_vta_dipole - Construct VRML Talairach dipole
brede_vta_drury brede_vta_drury - Construct VRML Talairach Drury cortex surface
brede_vta_exp brede_vta_exp - Contruct VRML Talairach model from 'exp'
brede_vta_grid brede_vta_grid - Construct VRML Talairach grid
brede_vta_loc brede_vta_loc - Plot VRML Talairach points
brede_vta_navigate brede_vta_navigate - Construct VRML Talairach NavigationInfo
brede_vta_open brede_vta_open - Open a VRML Talairach file
brede_vta_orientlab brede_vta_orientlab - Construct VRML Talairach Orientation labels
brede_vta_panmark brede_vta_panmark - Construct VRML Talairach PAN markers
brede_vta_patch brede_vta_patch - Construct 3D patch surface
brede_vta_patchwall brede_vta_patchwall - Construct 3D patch wall in a VRML file
brede_vta_point brede_vta_point - Plot VRML Talairach points
brede_vta_ruler brede_vta_ruler - Construct VRML Talairach ruler
brede_vta_sphere brede_vta_sphere - Construct VRML Talairach sphere
brede_vta_viewpoint brede_vta_viewpoint - Construct VRML Talairach viewpoints
brede_vta_volsurf brede_vta_volsurf - Construct VRML surface from a volume
brede_web brede_web Web structure and functions
brede_web_alltheweb brede_web_alltheweb - Perform an alltheweb search
brede_web_altavista brede_web_altavista - Perform an AltaVista search
brede_web_google brede_web_google - Perform an Google search
brede_web_pmid brede_web_pmid - Get abstract from PubMed identifier
brede_web_pubmed brede_web_pubmed - Search Pubmed
brede_web_spmmail brede_web_spmmail - Download SPM email
brede_web_url brede_web_url - Download a webpage
brede_web_web2html brede_web_web2html - Convert 'web' structure to HTML
brede_web_web2mat brede_web_web2mat - Convert 'web' structure to 'mat'
brede_web_web2urls brede_web_web2urls - Extract outgoing links as URLs.
brede_web_web2web brede_web_web2web - Convert 'web' structure
brede_web_wikipedia brede_web_wikipedia - Download a Wikipedia page
brede_write brede_write - File writing functions
brede_write_air brede_write_air - Write Roger Woods AIR file
brede_write_analyze brede_write_analyze - Writes an ANALYZE file
brede_write_csv brede_write_csv - Write comma-separated values file
brede_write_dot brede_write_dot - Write GraphViz dot file
brede_write_json brede_write_json - Write JSON file
brede_write_loc brede_write_loc - Write a 'loc' structure to a file
brede_write_loc2csv brede_write_loc2csv - Write 'loc' to comma separated values file
brede_write_mat2csv brede_write_mat2csv - Write comma-separated values file
brede_write_mricro_roibrede_write_mricro_roi - Write a MRIcro 'roi' file
brede_write_nuages brede_write_nuages - Write Nuages cnt file
brede_write_off brede_write_off - Write a GeomView OFF (OOGL) file
brede_write_png brede_write_png - Write a PNG file
brede_write_pov brede_write_pov - Write POV file
brede_write_strings brede_write_strings - Write strings to text file
brede_write_vol2xml brede_write_vol2xml - Write 'vol' structure as XML
brede_write_xml brede_write_xml - Write structure to XML
bredx_re_match bredx_re_match - Regular expresion matching with mex file.
bredx_vol_flood bredx_vol_flood - MEX header for flooding operation